fairmd.lipids.ipylib

Python files

Module contents

Routines for IPython/Jupyter notebooks.

fairmd.lipids.ipylib.plotSimulation(system, lipid: str)[source]

Creates plots of form factor and C-H bond order parameters for the selected lipid from a simulation given by system.

Parameters:

  • system – FAIRMD Lipids ID number of the simulation

  • lipid – universal molecul name of the lipid

fairmd.lipids.ipylib.showTable(sorted_qualities, quality)[source]

Shows a table of simulation qualities against experimental data.

Parameters:

  • sorted_qualities – list of dictionaries to be shown, available in folder Data/Ranking/

  • quality – should be either TotalQuality or universal lipid name. First one shows the system total quality. Latter shows the individual lipid quality.