fairmd.lipids.bin.initialize_data module

Initializes FAIRMD Lipids data folder for further work and creates databank_env.rc file.

Usage:

fmdl_initialize_data [toy|stable|dev|-h]
source databank_env.rc

• toy: copies ToyData from the package data. This Databank contains only 4 very small systems

• stable: download stable release from github.com/NMRlipids/BilayerData (even without git)

• dev: clone NMRlipids/BilayerData (requires git)

fairmd.lipids.bin.initialize_data.git_exists() → bool

Check if git is installed.

fairmd.lipids.bin.initialize_data.get_latest_release_tag() → str

Fetch the latest release tag from the GitHub API.

fairmd.lipids.bin.initialize_data.clone_repo(tag: str) → None

Clone the repository at the specified tag.

fairmd.lipids.bin.initialize_data.download_and_extract_zip(tag: str) → None

Download and extract the ZIP file of the specified tag (release).

fairmd.lipids.bin.initialize_data.download_toy_folder(dest: str = 'ToyData') → None

Download a folder from a package data.

fairmd.lipids.bin.initialize_data.initialize_data() → None

Code program logic.