developer.AutocompleteMetadata module

Script for membrane metadata autocomplete.

This script will try to fill further attributes in a membrane metadata file based on the information queried with the inchikey from: - UniChem - ChEMBL - ChEBI - PubChem

Note

This file is meant to be used by automated workflows.

developer.AutocompleteMetadata.check_api(url)

developer.AutocompleteMetadata.get_chembl(inchikey)

developer.AutocompleteMetadata.get_pubchem(inchikey)

developer.AutocompleteMetadata.get_pubchem_synonyms(cid)

developer.AutocompleteMetadata.get_chebi(chebi_id)

developer.AutocompleteMetadata.get_unichem(inchikey)

developer.AutocompleteMetadata.extract_sameas(sources)

developer.AutocompleteMetadata.get_chembl_id_from_unichem(sources)

developer.AutocompleteMetadata.load_existing_metadata(path)

developer.AutocompleteMetadata.update_metadata(existing, new_data)

developer.AutocompleteMetadata.main()